Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
1
DNase-seq
Assay category
DNA binding
12
DNA accessibility
9
Transcription
2
DNA methylation
Date released
19
April, 2020
3
November, 2018
2
March, 2020
1
October, 2017
Available data
4
bam
4
bigWig
4
fastq
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
24
Homo sapiens
Biosample type
25
tissue
Organ
728
pancreas
531
connective tissue
418
adipose tissue
389
epithelium
299
kidney
259
heart
234
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
LungMap
6
AMP
Genome assembly (visualization)
4
GRCh38
2
hg19
Lab
19
Xin Sun, UCSD
6
AMP-T2D consortium
month_released!
December, 2019
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
pCHi-C
ATAC-seq
DNase-seq
tissue
lung
10
9
1
spleen
2
1
1
1
Download