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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
137
ChIP-seq
Assay category
137
DNA binding
Target of assay
309
histone
309
histone modification
172
narrow histone mark
137
broad histone mark
66
control
9
transcription factor
Date released
45
August, 2017
44
May, 2021
41
November, 2017
October, 2017
7
August, 2021
Available data
414
bigWig
407
bed narrowPeak
365
bam
237
bigBed narrowPeak
137
tagAlign
104
fastq
34
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
133
Homo sapiens
Biosample type
66
tissue
51
primary cell
14
in vitro differentiated cells
6
cell line
Organ
35
brain
18
liver
12
connective tissue
8
musculature of body
8
pancreas
4
adipose tissue
1
epithelium
Project
93
AMP
44
T1D
Genome assembly (visualization)
97
GRCh38
80
hg19
Lab
93
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
6
inconsistent control read length
2
inconsistent assembly
month_released!
February, 2018
October, 2017
BIOSAMPLE
ASSAY
137 results
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ChIP-seq
tissue
liver
11
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
substantia nigra
8
+ See 5 more…
primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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