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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
total RNA-seq
2
ATAC-seq
1
ChIP-seq
1
Hi-C
1
RNA microarray
Assay category
7
Transcription
2
DNA accessibility
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
10
bigWig
9
tsv
8
bam
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
12
Homo sapiens
Biosample type
6
primary cell
5
cell line
1
tissue
Organ
14
pancreas
12
epithelium
8
liver
7
heart
5
kidney
5
musculature of body
4
blood vessel
4
vasculature
2
brain
2
connective tissue
2
intestine
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
9
AMP
3
T1D
Genome assembly (visualization)
11
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
1
audit script error
month_released!
February, 2018
BIOSAMPLE
ASSAY
12 results
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total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
RNA microarray
primary cell
hepatocyte
5
endothelial cell of umbilical vein
1
cell line
EndoC_BH1
2
2
1
tissue
renal glomerulus
1
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