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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
21
ATAC-seq
20
total RNA-seq
3
WGBS
1
DNase-seq
1
RRBS
Assay category
48
DNA binding
22
DNA accessibility
20
Transcription
4
DNA methylation
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
38
bed narrowPeak
38
bigWig
28
fastq
26
bam
20
tagAlign
6
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
94
Homo sapiens
Biosample type
94
tissue
Organ
292
pancreas
125
connective tissue
109
epithelium
94
liver
57
adipose tissue
28
musculature of body
Project
94
AMP
Genome assembly (visualization)
40
hg19
19
GRCh38
Lab
54
AMP-T2D consortium
40
Karen Mohlke, UNC
Audit category:
1
inconsistent control read length
month_released!
February, 2018
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
ATAC-seq
total RNA-seq
WGBS
DNase-seq
RRBS
tissue
liver
48
20
20
3
1
right lobe of liver
1
1
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