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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
10
total RNA-seq
1
GRO-seq
Assay category
10
DNA binding
10
Transcription
Target of assay
6
histone
6
histone modification
5
narrow histone mark
4
control
transcription factor
1
broad histone mark
Date released
February, 2018
10
December, 2017
8
August, 2021
2
May, 2021
1
January, 2018
Available data
20
bam
16
bigWig
11
fastq
10
tsv
5
bed narrowPeak
3
bed bed3+
Organism
21
Homo sapiens
Biosample type
13
in vitro differentiated cells
8
cell line
Organ
927
pancreas
644
connective tissue
515
epithelium
474
adipose tissue
453
liver
344
kidney
341
heart
283
brain
227
vasculature
222
blood vessel
159
bone element
136
artery
122
limb
96
musculature of body
60
eye
43
nerve
22
vein
21
embryo
20
lung
19
spleen
18
blood
18
bodily fluid
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
February, 2018
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
6
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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