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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
8
ATAC-seq
4
Hi-C
4
total RNA-seq
WGBS
Assay category
66
DNA binding
8
DNA accessibility
4
3D chromatin structure
4
Transcription
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
7
May, 2019
6
February, 2021
4
July, 2019
February, 2020
Available data
113
bam
92
bed narrowPeak
90
bigWig
84
bigBed narrowPeak
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
Organism
82
Homo sapiens
Biosample type
82
tissue
Organ
865
pancreas
772
liver
649
connective tissue
477
adipose tissue
456
epithelium
352
heart
276
kidney
239
brain
218
vasculature
214
blood vessel
159
bone element
135
artery
82
limb
69
blood
69
bodily fluid
59
musculature of body
56
eye
40
nerve
34
embryo
22
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
82
AMP
Genome assembly (visualization)
60
hg19
59
GRCh38
Lab
82
AMP-T2D consortium
month_released!
February, 2020
assay_title!
WGBS
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
82 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
tissue
tibial nerve
35
1
4
tibial artery
23
1
muscle of leg
7
gastrocnemius medialis
4
distal epiphysis of femur
1
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