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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
27
DNase-seq
22
ATAC-seq
Assay category
56
DNA binding
49
DNA accessibility
Target of assay
47
histone
47
histone modification
26
narrow histone mark
21
broad histone mark
9
RNA binding protein
9
transcription factor
1
chromatin remodeller
Date released
47
June, 2019
16
August, 2017
14
September, 2018
12
October, 2019
6
November, 2017
5
September, 2017
4
May, 2019
1
November, 2020
Available data
525
bam
519
bigWig
261
bed narrowPeak
252
tsv
229
fastq
105
bigBed narrowPeak
98
tagAlign
45
bed broadPeak
45
bigBed broadPeak
30
bed bed3+
1
bed bed3
1
hic
Organism
105
Homo sapiens
Biosample type
555
tissue
323
cell line
105
primary cell
15
in vitro differentiated cells
Organ
60
epithelium
22
pancreas
20
vasculature
16
blood vessel
16
kidney
15
connective tissue
12
vein
11
brain
9
musculature of body
6
heart
3
eye
2
liver
Project
105
AMP
Genome assembly (visualization)
105
GRCh38
102
hg19
Lab
105
AMP-T2D consortium
Audit category:
23
inconsistent ontology term
Audit category:
2
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
month_released!
February, 2020
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
skeletal muscle myoblast
13
endothelial cell of umbilical vein
10
2
pancreatic beta cell
7
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
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