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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
336
ChIP-seq
Assay category
336
DNA binding
Target of assay
236
transcription factor
86
histone
86
histone modification
66
recombinant protein
50
broad histone mark
36
narrow histone mark
35
RNA binding protein
15
chromatin remodeller
11
control
2
other context
2
other post-translational modification
Date released
336
November, 2017
210
June, 2019
119
October, 2019
110
August, 2017
97
May, 2019
90
May, 2021
73
November, 2018
64
April, 2019
50
December, 2017
50
May, 2020
45
October, 2018
30
December, 2018
24
August, 2021
21
January, 2019
14
October, 2017
14
September, 2018
8
February, 2021
5
September, 2017
2
July, 2019
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
336
Homo sapiens
Biosample type
252
cell line
78
tissue
6
primary cell
Organ
252
liver
84
brain
4
epithelium
4
vasculature
2
blood vessel
Project
336
AMP
Genome assembly (visualization)
280
GRCh38
262
hg19
Lab
336
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
February, 2020
BIOSAMPLE
ASSAY
336 results
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Clear Filters
ChIP-seq
cell line
HepG2
252
tissue
layer of hippocampus
20
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
13
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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