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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
22
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
29
DNA binding
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
16
June, 2019
14
October, 2019
14
September, 2018
12
December, 2017
5
September, 2017
3
August, 2017
3
May, 2019
2
November, 2017
Available data
309
bam
293
bigWig
253
fastq
156
tsv
143
bed narrowPeak
80
zippedFastqFolder
69
bigBed narrowPeak
21
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
69
Homo sapiens
Biosample type
56
primary cell
12
in vitro differentiated cells
1
cell line
Organ
303
liver
124
brain
102
kidney
88
heart
85
pancreas
84
limb
78
vasculature
75
blood vessel
69
epithelium
47
musculature of body
44
blood
44
bodily fluid
26
nerve
24
artery
22
connective tissue
18
ureter
13
spleen
13
vein
5
adipose tissue
5
eye
Project
69
AMP
Genome assembly (visualization)
68
GRCh38
63
hg19
Lab
69
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
February, 2020
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
kidney epithelial cell
3
1
+ See 12 more…
in vitro differentiated cells
hepatocyte
12
cell line
glomerular visceral epithelial cell
1
See all biosamples
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