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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
676
ChIP-seq
154
total RNA-seq
128
single cell RNA-seq
56
ATAC-seq
27
snATAC-seq
13
WGBS
9
DNase-seq
5
GRO-seq
1
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
56
DNA accessibility
Date released
18
May, 2022
14
September, 2018
8
October, 2017
7
August, 2020
August, 2017
5
September, 2017
3
September, 2020
1
March, 2019
Available data
273
bed narrowPeak
170
bam
131
bigWig
64
xls
56
fastq
39
zippedFastqFolder
22
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
56
Homo sapiens
Biosample type
29
primary cell
27
tissue
Organ
53
pancreas
29
epithelium
1
adipose tissue
1
brain
1
connective tissue
1
spleen
Project
46
AMP
10
HPAP
Genome assembly (visualization)
44
hg19
37
GRCh38
Lab
26
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
month_released!
February, 2020
August, 2017
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
primary cell
pancreatic alpha cell
12
pancreatic beta cell
9
pancreatic acinar cell
4
pancreatic ductal cell
4
tissue
islet of Langerhans
20
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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