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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
405
transcription factor
193
histone modification
192
histone
168
control
98
broad histone mark
93
narrow histone mark
82
recombinant protein
80
RNA binding protein
31
chromatin remodeller
4
other context
4
other post-translational modification
Date released
30
November, 2017
21
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
4
December, 2017
2
December, 2018
Available data
106
bigWig
105
bed narrowPeak
103
bam
93
bigBed narrowPeak
89
fastq
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
80
Homo sapiens
Biosample type
59
cell line
15
tissue
6
in vitro differentiated cells
Organ
53
liver
10
blood
10
bodily fluid
9
connective tissue
8
pancreas
5
adipose tissue
2
epithelium
Project
80
AMP
Genome assembly (visualization)
77
hg19
75
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
month_released!
February, 2020
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
cell line
HepG2
49
GM12878
10
tissue
body of pancreas
5
omental fat pad
3
islet of Langerhans
2
subcutaneous adipose tissue
2
liver
1
+ See 2 more…
in vitro differentiated cells
adipocyte
4
hepatocyte
2
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