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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
10
snATAC-seq
9
single cell RNA-seq
4
total RNA-seq
1
pCHi-C
Assay category
22
DNA accessibility
13
Transcription
Date released
19
April, 2020
8
February, 2021
8
February, 2023
1
March, 2020
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
1
tsv
Organism
35
Homo sapiens
Biosample type
36
tissue
Organ
945
pancreas
790
liver
682
connective tissue
524
epithelium
489
adipose tissue
390
heart
354
kidney
274
brain
233
vasculature
227
blood vessel
159
bone element
139
artery
119
limb
94
musculature of body
69
blood
69
bodily fluid
60
eye
42
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
19
LungMap
17
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
19
Xin Sun, UCSD
17
AMP-T2D consortium
month_released!
February, 2020
organ_slims!
skin of body
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
lung
10
9
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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