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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
10
snATAC-seq
9
single cell RNA-seq
1
pCHi-C
Assay category
71
Transcription
22
DNA accessibility
Date released
150
February, 2021
19
April, 2020
8
February, 2023
March, 2020
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
177
Homo sapiens
Biosample type
177
tissue
1
primary cell
Organ
931
pancreas
787
liver
680
connective tissue
518
epithelium
488
adipose tissue
383
heart
352
kidney
272
brain
229
vasculature
223
blood vessel
159
bone element
139
artery
119
limb
89
musculature of body
69
blood
69
bodily fluid
60
eye
42
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
158
AMP
19
LungMap
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
158
AMP-T2D consortium
19
Xin Sun, UCSD
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
month_released!
February, 2020
March, 2020
BIOSAMPLE
ASSAY
178 results
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RNA microarray
total RNA-seq
ATAC-seq
snATAC-seq
single cell RNA-seq
pCHi-C
tissue
bone element
84
bone tissue
58
lung
10
9
acetabular part of hip bone
1
1
ilium
1
1
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primary cell
megakaryocyte
1
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