Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
602
ChIP-seq
293
ATAC-seq
250
total RNA-seq
245
single cell RNA-seq
57
snATAC-seq
55
pCHi-C
52
WGBS
32
Hi-C
21
RRBS
10
MeRIP-seq
5
DNase-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
5
DNA accessibility
Date released
3
August, 2017
2
October, 2019
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Organ
2
epithelium
2
kidney
1
liver
Project
5
AMP
Genome assembly (visualization)
GRCh38
186
hg19
Lab
5
AMP-T2D consortium
month_released!
February, 2021
assembly!
GRCh38
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
skeletal muscle myoblast
2
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
right lobe of liver
1
Download