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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
Assay category
19
DNA methylation
Date released
15
July, 2019
4
August, 2017
Available data
429
bam
362
fastq
239
bigWig
186
tsv
185
bed narrowPeak
153
zippedFastqFolder
149
tagAlign
72
txt
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
bigBed broadPeak
13
bed bed3+
10
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
vcf
Organism
19
Homo sapiens
Biosample type
10
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
Genome assembly (visualization)
19
hg19
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
February, 2021
assembly!
GRCh38
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
19 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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