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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
Assay category
3
DNA accessibility
Date released
February, 2021
3
February, 2023
Available data
2817
bam
2615
bigWig
1792
bed narrowPeak
1309
fastq
1042
bigBed narrowPeak
1035
tsv
390
tagAlign
322
bed broadPeak
285
bigBed broadPeak
268
bed bed3+
153
zippedFastqFolder
72
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
biosample_type!
stem cell
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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