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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
total RNA-seq
4
Hi-C
2
ATAC-seq
1
WGBS
Assay category
18
DNA binding
7
Transcription
4
3D chromatin structure
2
DNA accessibility
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2019
February, 2021
5
July, 2019
3
February, 2020
1
May, 2019
Available data
108
bam
91
bigWig
86
bed narrowPeak
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
32
Homo sapiens
Biosample type
32
tissue
Organ
823
pancreas
430
liver
416
epithelium
242
kidney
201
connective tissue
193
heart
159
brain
95
adipose tissue
87
vasculature
85
blood vessel
55
eye
50
artery
49
musculature of body
37
embryo
32
limb
20
lung
17
nerve
15
blood
15
bodily fluid
12
spleen
9
bone element
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
32
AMP
Genome assembly (visualization)
7
GRCh38
6
hg19
Lab
32
AMP-T2D consortium
month_released!
February, 2021
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
total RNA-seq
Hi-C
ATAC-seq
WGBS
tissue
tibial nerve
11
5
1
tibial artery
5
1
1
gastrocnemius medialis
1
4
muscle of leg
1
1
islet of Langerhans
1
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