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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
Assay category
46
DNA binding
Target of assay
268
control
72
histone
72
histone modification
46
narrow histone mark
26
broad histone mark
18
transcription factor
8
RNA binding protein
5
nucleotide modification
1
recombinant protein
Date released
August, 2017
24
October, 2019
12
May, 2021
8
November, 2017
1
December, 2017
1
October, 2017
Available data
bigWig
379
bed narrowPeak
353
bam
145
tagAlign
137
bigBed narrowPeak
58
fastq
14
bed broadPeak
9
bigBed broadPeak
7
bed bed3+
1
tagAlign bed3+
Organism
46
Homo sapiens
Biosample type
32
tissue
11
in vitro differentiated cells
3
primary cell
Organ
11
brain
4
gonad
4
ovary
2
eye
1
blood vessel
1
connective tissue
1
embryo
1
epithelium
1
limb
1
lymph node
1
vasculature
1
vein
Project
46
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
36
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
month_released!
February, 2021
August, 2017
files.file_type!
bigWig
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
tissue
islet of Langerhans
21
cingulate gyrus
3
substantia nigra
2
brain
1
caudate nucleus
1
+ See 4 more…
in vitro differentiated cells
embryonic stem cell
10
pancreatic endoderm
1
primary cell
endothelial cell of umbilical vein
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
See all biosamples
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