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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
38
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
58
DNA binding
41
DNA accessibility
Target of assay
58
histone
58
histone modification
39
broad histone mark
19
narrow histone mark
Date released
61
October, 2019
32
June, 2019
February, 2021
6
May, 2019
Available data
128
bam
106
bigWig
99
bed narrowPeak
97
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
38
bed bed3+
7
tsv
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
99
Homo sapiens
Biosample type
86
tissue
13
primary cell
Organ
440
liver
214
pancreas
203
brain
183
kidney
179
heart
151
epithelium
121
vasculature
117
blood vessel
86
limb
74
connective tissue
62
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
1
pituitary gland
Project
99
AMP
Genome assembly (visualization)
99
hg19
97
GRCh38
Lab
99
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
BIOSAMPLE
ASSAY
99 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
forelimb muscle
1
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primary cell
endothelial cell of umbilical vein
10
2
1
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