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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
total RNA-seq
8
single cell RNA-seq
ATAC-seq
1
MPRA
Assay category
67
Transcription
Date released
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2606
bam
2416
bigWig
1474
bed narrowPeak
1250
fastq
1018
tsv
968
bigBed narrowPeak
375
tagAlign
274
bed broadPeak
252
bigBed broadPeak
233
bed bed3+
114
zippedFastqFolder
68
txt
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
5
hdf5
4
tar
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
67
Homo sapiens
Biosample type
67
tissue
1
cell line
Organ
57
kidney
6
pancreas
4
bone element
4
skeleton
musculature of body
Project
68
AMP
Lab
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
5
AMP-T2D consortium
month_released!
February, 2021
assay_title!
ATAC-seq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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