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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
total RNA-seq
8
single cell RNA-seq
ATAC-seq
1
snATAC-seq
Assay category
67
Transcription
1
DNA accessibility
Date released
February, 2021
57
August, 2021
7
May, 2022
4
February, 2023
Available data
2656
bam
2477
bigWig
1528
bed narrowPeak
1245
fastq
1027
tsv
1009
bigBed narrowPeak
383
tagAlign
314
bed broadPeak
285
bigBed broadPeak
267
bed bed3+
114
zippedFastqFolder
68
txt
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
5
hdf5
4
tar
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
68
Homo sapiens
Biosample type
68
tissue
Organ
57
kidney
6
pancreas
4
bone element
4
skeleton
1
musculature of body
Project
68
AMP
Genome assembly (visualization)
1
hg19
Lab
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
5
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
February, 2021
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
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