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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
8
single cell RNA-seq
1
MPRA
Assay category
61
Transcription
Date released
February, 2021
57
August, 2021
May, 2022
4
February, 2023
1
October, 2022
Available data
2796
bam
2593
bigWig
1752
bed narrowPeak
1289
fastq
1042
bigBed narrowPeak
1041
tsv
390
tagAlign
322
bed broadPeak
285
bigBed broadPeak
268
bed bed3+
64
xls
62
txt
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
19
zippedFastqFolder
10
bed bed3
5
hdf5
4
tar
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
61
Homo sapiens
Biosample type
61
tissue
1
cell line
Organ
57
kidney
4
bone element
4
skeleton
Project
62
AMP
Lab
57
Katalin Susztak, Upenn
5
AMP-T2D consortium
Struan F.A. Grant, CHOP
month_released!
February, 2021
May, 2022
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
62 results
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total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
8
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
cell line
MIN6
1
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