Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1271
ChIP-seq
799
total RNA-seq
487
ATAC-seq
345
single cell RNA-seq
206
DNase-seq
64
WGBS
57
snATAC-seq
53
pCHi-C
30
Hi-C
19
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
STARR-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
19
DNA methylation
Date released
14
July, 2019
5
August, 2017
Available data
17
bed bedMethyl
17
bigBed bedMethyl
3
fastq
Organism
19
Homo sapiens
Biosample type
10
tissue
9
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
Genome assembly (visualization)
17
hg19
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
February, 2021
organ_slims!
liver
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
RRBS
tissue
skeletal muscle tissue
4
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 2 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 4 more…
See all biosamples
Download