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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
23
ChIP-seq
4
DNase-seq
4
total RNA-seq
2
single cell RNA-seq
Assay category
41
DNA accessibility
23
DNA binding
6
Transcription
Target of assay
18
histone
18
histone modification
14
broad histone mark
5
control
4
narrow histone mark
Date released
February, 2021
35
February, 2023
26
October, 2019
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
59
bed narrowPeak
31
bam
26
bigWig
22
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
70
Homo sapiens
Biosample type
68
tissue
2
primary cell
Organ
912
pancreas
788
liver
487
epithelium
341
kidney
266
heart
258
brain
229
connective tissue
120
vasculature
114
blood vessel
109
limb
105
adipose tissue
89
musculature of body
70
artery
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
61
GRCh38
26
hg19
Lab
70
AMP-T2D consortium
month_released!
February, 2021
May, 2019
BIOSAMPLE
ASSAY
70 results
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ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
36
2
1
tibial artery
1
23
2
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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