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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
8
DNase-seq
6
total RNA-seq
Hi-C
3
ATAC-seq
1
FAIRE-seq
Assay category
72
DNA binding
12
DNA accessibility
6
Transcription
Target of assay
67
histone
67
histone modification
43
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
1
control
Date released
February, 2021
39
May, 2019
36
October, 2019
7
July, 2019
4
June, 2019
3
November, 2017
1
March, 2020
Available data
90
bam
90
bigWig
81
bed narrowPeak
78
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
8
bed bed3+
6
tsv
3
fastq
1
tar
Organism
90
Homo sapiens
Biosample type
69
tissue
21
primary cell
Organ
624
pancreas
620
liver
277
epithelium
161
brain
133
connective tissue
128
kidney
121
heart
96
vasculature
90
blood vessel
90
limb
71
musculature of body
55
blood
55
bodily fluid
40
adipose tissue
34
eye
31
nerve
29
artery
29
embryo
18
ureter
15
vein
14
spleen
4
bone element
4
skeleton
2
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
123
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
month_released!
February, 2021
assay_title!
Hi-C
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
18
2
1
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
coronary artery
3
2
1
primary cell
endothelial cell of umbilical vein
12
2
1
brain microvascular endothelial cell
3
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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