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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
38
ATAC-seq
9
DNase-seq
9
total RNA-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
93
DNA binding
38
DNA accessibility
Target of assay
70
histone
70
histone modification
45
broad histone mark
25
narrow histone mark
19
control
4
RNA binding protein
4
transcription factor
Date released
50
May, 2019
41
October, 2019
35
February, 2023
February, 2021
3
November, 2017
2
July, 2019
Available data
107
bed narrowPeak
96
bam
75
bigWig
69
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Organism
131
Homo sapiens
Biosample type
111
tissue
20
primary cell
Organ
574
liver
370
pancreas
232
epithelium
222
brain
173
connective tissue
167
heart
134
vasculature
131
blood vessel
127
kidney
79
adipose tissue
68
limb
65
artery
61
blood
61
bodily fluid
40
musculature of body
36
nerve
33
eye
22
embryo
21
spleen
17
vein
4
bone element
4
gonad
4
ovary
4
skeleton
2
pituitary gland
1
lymph node
1
skin of body
Project
131
AMP
Genome assembly (visualization)
107
GRCh38
75
hg19
Lab
131
AMP-T2D consortium
month_released!
February, 2021
BIOSAMPLE
ASSAY
131 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
coronary artery
5
36
tibial artery
23
1
thoracic aorta
16
1
ascending aorta
16
aorta
13
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
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