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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
38
ATAC-seq
9
DNase-seq
9
total RNA-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
2
pCHi-C
1
FAIRE-seq
Assay category
97
DNA binding
Target of assay
74
histone
74
histone modification
45
broad histone mark
29
narrow histone mark
19
control
4
RNA binding protein
4
transcription factor
Date released
50
May, 2019
44
October, 2019
February, 2021
3
November, 2017
Available data
93
bam
72
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Organism
97
Homo sapiens
Biosample type
77
tissue
20
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
128
heart
96
vasculature
93
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
28
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
97
AMP
Genome assembly (visualization)
72
hg19
69
GRCh38
Lab
97
AMP-T2D consortium
month_released!
February, 2021
BIOSAMPLE
ASSAY
97 results
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ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
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primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
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