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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
4
ChIP-seq
Assay category
37
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
33
June, 2019
6
October, 2019
2
November, 2017
Available data
255
bed narrowPeak
254
bigWig
249
bam
168
bigBed narrowPeak
129
tsv
41
bed broadPeak
41
bigBed broadPeak
39
bed bed3+
9
bed bedMethyl
9
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
fastq
2
hdf5
1
tar
Organism
41
Homo sapiens
Biosample type
30
tissue
11
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
41
AMP
Genome assembly (visualization)
39
GRCh38
37
hg19
Lab
41
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
BIOSAMPLE
ASSAY
41 results
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DNase-seq
ChIP-seq
tissue
heart
18
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
tibial artery
2
+ See 3 more…
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
kidney capillary endothelial cell
1
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