Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
148
ChIP-seq
32
DNase-seq
1
FAIRE-seq
Assay category
148
DNA binding
33
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
54
transcription factor
34
narrow histone mark
13
RNA binding protein
10
chromatin remodeller
Date released
63
November, 2017
30
June, 2019
27
December, 2018
25
May, 2019
15
January, 2019
14
November, 2018
6
October, 2017
1
July, 2019
Available data
303
bam
277
bigWig
257
bed narrowPeak
181
bigBed narrowPeak
118
tagAlign
81
fastq
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
181
Homo sapiens
Biosample type
116
tissue
54
cell line
11
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
181
AMP
Genome assembly (visualization)
180
GRCh38
119
hg19
Lab
181
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
3
missing controlled_by
month_released!
February, 2021
BIOSAMPLE
ASSAY
181 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 14 more…
cell line
GM12878
54
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
Download