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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
4
DNase-seq
4
total RNA-seq
single cell RNA-seq
Assay category
41
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
February, 2021
35
February, 2023
26
October, 2019
5
May, 2019
3
July, 2019
2
February, 2020
2
June, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
73
Homo sapiens
Biosample type
71
tissue
2
primary cell
Organ
826
pancreas
788
liver
421
epithelium
287
kidney
283
brain
234
heart
224
connective tissue
164
vasculature
158
blood vessel
116
limb
104
adipose tissue
95
musculature of body
73
artery
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
18
ureter
10
lung
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
73
AMP
Genome assembly (visualization)
64
GRCh38
29
hg19
Lab
73
AMP-T2D consortium
month_released!
February, 2021
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
73 results
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ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
tissue
coronary artery
36
5
2
1
tibial artery
1
23
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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