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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ATAC-seq
1
DNase-seq
Assay category
198
DNA binding
134
Transcription
31
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
1
August, 2017
Available data
20
bed narrowPeak
18
bam
10
bigWig
4
bed bedgraph
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
31
Homo sapiens
Biosample type
389
tissue
276
primary cell
31
cell line
31
in vitro differentiated cells
Organ
9
connective tissue
Project
31
AMP
Genome assembly (visualization)
31
hg19
18
GRCh38
Lab
24
AMP-T2D consortium
5
Kyle Gaulton, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
7
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
7
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
embryonic stem cell
5
cardiac precursors (cardiac muscle cell)
1
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