Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
ATAC-seq
1
RRBS
Assay category
14
Transcription
5
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
21
October, 2019
7
June, 2019
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
tsv
Organism
29
Homo sapiens
Biosample type
24
tissue
5
primary cell
Organ
617
liver
473
pancreas
330
kidney
318
epithelium
259
brain
192
connective tissue
189
heart
133
vasculature
127
blood vessel
115
limb
93
bone element
89
adipose tissue
87
musculature of body
69
blood
69
bodily fluid
48
artery
38
nerve
29
eye
24
spleen
23
embryo
22
vein
19
lung
18
ureter
8
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
29
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
29
AMP-T2D consortium
month_released!
February, 2023
assay_title!
DNAme array
files.file_type!
tsv
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
RRBS
tissue
islet of Langerhans
14
2
4
1
retina
3
primary cell
retinal pigment epithelial cell
3
1
1
Download