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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ATAC-seq
Assay category
137
Transcription
37
DNA binding
33
DNA accessibility
5
3D chromatin structure
2
DNA methylation
Date released
16
May, 2021
February, 2023
7
November, 2019
June, 2019
4
May, 2020
4
October, 2019
2
March, 2020
Available data
15
bam
11
bed narrowPeak
6
bigWig
1
tsv
Organism
33
Homo sapiens
Biosample type
19
cell line
7
in vitro differentiated cells
6
primary cell
1
tissue
Organ
20
epithelium
19
pancreas
1
adipose tissue
1
connective tissue
1
liver
Project
33
AMP
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
33
inconsistent ontology term
29
audit script error
1
inconsistent replicate
month_released!
February, 2023
June, 2019
BIOSAMPLE
ASSAY
33 results
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ATAC-seq
cell line
EndoC_BH1
19
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
tissue
adipose tissue(adipose white tissue)
1
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