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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
4
DNase-seq
Assay category
17
DNA binding
4
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
3
RNA binding protein
transcription factor
Date released
20
June, 2019
1
May, 2019
Available data
198
bam
177
bigWig
144
tsv
84
txt
48
bed narrowPeak
21
bigBed narrowPeak
11
fastq
7
bedpe bed3+
5
hic
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
Organism
21
Homo sapiens
Biosample type
20
primary cell
1
tissue
Organ
9
connective tissue
8
musculature of body
3
epithelium
3
heart
3
kidney
1
limb
1
vasculature
Project
21
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
month_released!
February, 2023
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
1
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
+ See 1 more…
tissue
muscle of leg
1
See all biosamples
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