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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
39
ATAC-seq
16
total RNA-seq
3
Hi-C
Assay category
101
Transcription
87
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
February, 2023
56
September, 2020
45
February, 2021
3
October, 2022
Available data
153
zippedFastqFolder
93
fastq
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
238
Homo sapiens
Biosample type
238
primary cell
Organ
105
epithelium
105
pancreas
Project
1216
AMP
238
HPAP
47
KPMP
35
T1D
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
238
Klaus Kaestner, Upenn
Audit category:
30
audit script error
month_released!
February, 2023
files.file_type!
bigWig
BIOSAMPLE
ASSAY
238 results
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single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
total RNA-seq
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
31
22
15
1
pancreatic beta cell
16
13
1
1
pancreatic acinar cell
4
1
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