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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
4
DNase-seq
4
total RNA-seq
2
ATAC-seq
2
single cell RNA-seq
Assay category
28
DNA binding
6
DNA accessibility
6
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
February, 2023
26
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
36
bam
29
bigWig
27
bed narrowPeak
25
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
40
Homo sapiens
Biosample type
cell line
38
tissue
2
primary cell
Organ
799
pancreas
670
connective tissue
490
adipose tissue
394
epithelium
390
liver
335
kidney
285
brain
251
heart
151
bone element
135
vasculature
129
blood vessel
122
limb
96
musculature of body
43
nerve
40
artery
30
eye
29
embryo
25
spleen
22
vein
20
lung
18
ureter
8
blood
8
bodily fluid
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
40
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
40
AMP-T2D consortium
month_released!
February, 2023
biosample_type!
cell line
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
tibial artery
23
2
1
1
coronary artery
5
2
1
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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