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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
15
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
24
Homo sapiens
Biosample type
22
tissue
2
primary cell
Organ
267
pancreas
223
kidney
171
epithelium
169
liver
133
heart
100
connective tissue
93
bone element
65
adipose tissue
63
brain
46
vasculature
45
blood vessel
31
limb
28
musculature of body
24
eye
21
artery
20
lung
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
8
skeleton
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
1
hg19
Lab
24
AMP-T2D consortium
month_released!
February, 2023
files.file_type!
bigWig
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
1
primary cell
retinal pigment epithelial cell
1
1
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