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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
Assay category
31
DNA binding
Target of assay
16
histone
16
histone modification
15
transcription factor
11
chromatin remodeller
8
broad histone mark
8
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
19
November, 2017
6
August, 2017
5
November, 2018
1
October, 2018
Available data
56
bam
56
bigWig
56
fastq
54
bed narrowPeak
31
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
31
Homo sapiens
Biosample type
24
cell line
6
tissue
1
primary cell
Organ
25
liver
5
pancreas
Project
31
AMP
Genome assembly (visualization)
31
hg19
29
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
31
inconsistent control read length
9
inconsistent control run_type
3
inconsistent assembly
month_released!
February, 2023
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
cell line
HepG2
24
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
skeletal muscle myoblast
1
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