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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
DNase-seq
6
ChIP-seq
4
ATAC-seq
Assay category
12
DNA accessibility
6
DNA binding
Target of assay
5
RNA binding protein
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
5
June, 2019
5
October, 2018
3
August, 2017
3
October, 2019
1
November, 2018
1
November, 2020
Available data
580
bam
560
bigWig
477
tsv
101
fastq
63
bed narrowPeak
22
bed bed3+
22
tagAlign
18
bigBed narrowPeak
9
bed broadPeak
8
bigBed broadPeak
4
bed bedgraph
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
bedpe bed3+
1
hdf5
Organism
18
Homo sapiens
Biosample type
10
tissue
5
primary cell
3
in vitro differentiated cells
Organ
358
liver
127
brain
99
kidney
91
pancreas
90
heart
83
limb
82
vasculature
79
blood vessel
71
epithelium
54
blood
54
bodily fluid
39
musculature of body
26
nerve
25
artery
18
connective tissue
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
18
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
February, 2023
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
18 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
omental fat pad
2
3
subcutaneous adipose tissue
2
1
adipose tissue
1
1
primary cell
cardiac fibroblast
2
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
2
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