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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ATAC-seq
64
snATAC-seq
Assay category
251
Transcription
215
DNA accessibility
58
DNA binding
47
DNA methylation
8
3D chromatin structure
1
DNA sequencing
Date released
80
May, 2022
72
August, 2021
27
February, 2021
11
May, 2023
10
April, 2020
7
August, 2020
4
March, 2019
February, 2023
3
September, 2020
1
October, 2017
Available data
86
bed narrowPeak
64
xls
60
zippedFastqFolder
39
fastq
33
bigWig
2
bed broadPeak
1
bam
Organism
214
Homo sapiens
Biosample type
116
tissue
97
primary cell
2
in vitro differentiated cells
Organ
81
kidney
54
pancreas
49
epithelium
20
liver
10
lung
2
connective tissue
Project
108
AMP
97
HPAP
10
LungMap
Genome assembly (visualization)
88
GRCh38
25
hg19
Lab
AMP-T2D consortium
97
Klaus Kaestner, Upenn
81
Katalin Susztak, Upenn
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
2
Mark McCarthy, Oxford
2
Struan F.A. Grant, CHOP
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
month_released!
February, 2023
lab.title!
Kyle Gaulton, UCSD
AMP-T2D consortium
BIOSAMPLE
ASSAY
215 results
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Clear Filters
ATAC-seq
snATAC-seq
tissue
kidney
75
6
liver
20
lung
10
islet of Langerhans
5
primary cell
Langerhans cell
48
pancreatic alpha cell
29
pancreatic beta cell
16
pancreatic acinar cell
4
in vitro differentiated cells
adipocyte
1
osteoblast
1
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