Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
ATAC-seq
Assay category
15
Transcription
5
DNA accessibility
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
21
October, 2019
7
June, 2019
1
February, 2020
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
1
tsv
Organism
29
Homo sapiens
Biosample type
25
tissue
4
primary cell
Organ
884
pancreas
788
liver
667
connective tissue
488
adipose tissue
466
epithelium
327
kidney
292
heart
283
brain
199
vasculature
194
blood vessel
151
bone element
121
limb
106
artery
92
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
29
eye
23
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
29
AMP-T2D consortium
month_released!
February, 2023
April, 2019
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
tissue
islet of Langerhans
14
2
4
1
retina
1
3
primary cell
retinal pigment epithelial cell
3
1
Download