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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
Assay category
15
Transcription
4
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
February, 2023
3
June, 2019
1
February, 2020
Available data
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
1
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
890
pancreas
791
liver
670
connective tissue
490
adipose tissue
epithelium
331
kidney
285
brain
260
heart
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
25
AMP-T2D consortium
month_released!
February, 2023
April, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
25 results
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total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
14
4
2
1
retina
1
3
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