Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
14
small RNA-seq
12
WGBS
10
RRBS
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
43
Transcription
22
DNA methylation
7
3D chromatin structure
7
DNA accessibility
Target of assay
3
control
Date released
406
November, 2017
397
May, 2021
341
May, 2020
286
August, 2017
280
October, 2019
252
February, 2021
200
May, 2022
February, 2023
184
August, 2021
166
July, 2018
119
June, 2019
115
May, 2019
94
December, 2017
87
November, 2018
79
July, 2019
73
September, 2018
60
March, 2020
60
November, 2019
59
September, 2020
57
April, 2019
53
October, 2018
47
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
11
September, 2017
10
November, 2020
7
August, 2020
7
December, 2019
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
61
bigWig
59
bam
43
tsv
18
bed bedMethyl
18
bigBed bedMethyl
6
bed narrowPeak
3
bed bed3+
3
hdf5
1
bigBed narrowPeak
Organism
79
Homo sapiens
Biosample type
63
tissue
16
primary cell
Organ
25
heart
18
brain
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
79
AMP
Genome assembly (visualization)
62
hg19
57
GRCh38
Lab
79
AMP-T2D consortium
month_released!
February, 2023
organ_slims!
connective tissue
kidney
BIOSAMPLE
ASSAY
79 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
WGBS
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 22 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 9 more…
See all biosamples
Download