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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
24
DNase-seq
3
single cell RNA-seq
Assay category
31
DNA binding
24
DNA accessibility
3
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
206
May, 2021
147
May, 2020
134
May, 2022
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
58
bam
50
bigWig
47
bed narrowPeak
47
bigBed narrowPeak
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
3
fastq
3
tsv
Organism
58
Homo sapiens
Biosample type
163
tissue
58
primary cell
Organ
21
epithelium
17
connective tissue
13
kidney
11
musculature of body
8
heart
5
brain
4
eye
4
vasculature
2
blood vessel
2
liver
1
pancreas
Project
58
AMP
Genome assembly (visualization)
50
GRCh38
43
hg19
Lab
58
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
DNase-seq
single cell RNA-seq
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
3
1
epithelial cell of proximal tubule
3
1
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