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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
3
single cell RNA-seq
Assay category
19
DNA binding
3
Transcription
Target of assay
802
histone modification
801
histone
488
transcription factor
416
narrow histone mark
384
broad histone mark
102
RNA binding protein
88
recombinant protein
36
chromatin remodeller
22
control
5
other context
5
other post-translational modification
Date released
15
November, 2017
3
July, 2019
3
May, 2021
1
August, 2017
Available data
285
bam
167
fastq
66
tagAlign
22
bigWig
9
bed bed3+
3
tsv
Organism
22
Homo sapiens
Biosample type
13
cell line
9
primary cell
Organ
13
liver
6
brain
2
epithelium
2
vasculature
blood vessel
Project
22
AMP
Genome assembly (visualization)
22
hg19
3
GRCh38
Lab
19
AMP-T2D consortium
3
Kyle Gaulton, UCSD
month_released!
February, 2023
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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