Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
73
total RNA-seq
9
ATAC-seq
5
ChIP-seq
5
pCHi-C
4
DNase-seq
1
RRBS
Assay category
73
Transcription
13
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
150
February, 2021
February, 2023
21
October, 2019
7
June, 2019
1
February, 2020
1
July, 2019
1
May, 2021
Available data
84
txt
73
bam
64
bigWig
59
tsv
14
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
181
Homo sapiens
Biosample type
175
tissue
6
primary cell
Organ
890
pancreas
791
liver
670
connective tissue
490
adipose tissue
472
epithelium
354
kidney
317
heart
285
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
180
AMP
1
T1D
Genome assembly (visualization)
73
hg19
72
GRCh38
Lab
180
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
181 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
DNase-seq
RRBS
tissue
bone element
84
bone tissue
58
islet of Langerhans
14
1
2
4
retina
1
3
distal epiphysis
1
+ See 7 more…
primary cell
retinal pigment epithelial cell
3
1
1
megakaryocyte
1
See all biosamples
Download