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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
30
DNase-seq
12
ATAC-seq
Assay category
114
DNA binding
42
DNA accessibility
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
February, 2023
33
June, 2019
15
May, 2019
12
February, 2021
5
October, 2019
4
July, 2019
Available data
224
bigWig
211
bam
168
tsv
156
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
156
Homo sapiens
Biosample type
138
tissue
12
cell line
6
primary cell
Organ
441
liver
214
pancreas
203
brain
183
kidney
156
heart
139
epithelium
98
vasculature
94
blood vessel
92
limb
74
connective tissue
60
musculature of body
54
blood
54
bodily fluid
39
artery
27
nerve
18
ureter
14
embryo
14
spleen
13
vein
12
adipose tissue
8
bone element
8
skeleton
6
eye
1
pituitary gland
Project
156
AMP
Genome assembly (visualization)
155
GRCh38
113
hg19
Lab
116
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
156 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
left cardiac atrium
40
1
heart left ventricle
29
3
2
heart
12
18
heart right ventricle
11
1
right atrium auricular region
7
2
1
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
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