Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ATAC-seq
19
DNase-seq
1
FAIRE-seq
Assay category
162
Transcription
111
DNA accessibility
85
DNA binding
53
DNA methylation
8
3D chromatin structure
Date released
39
May, 2022
16
May, 2021
14
June, 2019
14
September, 2018
February, 2023
7
August, 2020
7
October, 2019
5
September, 2017
3
August, 2017
3
September, 2020
2
March, 2020
1
November, 2019
Available data
52
bigWig
42
bam
42
bed narrowPeak
40
bigBed narrowPeak
39
zippedFastqFolder
32
fastq
16
bed bed3+
16
bed broadPeak
16
bigBed broadPeak
1
tar
1
tsv
Organism
111
Homo sapiens
Biosample type
91
primary cell
20
cell line
Organ
163
kidney
160
pancreas
111
epithelium
44
limb
42
heart
36
brain
35
musculature of body
29
liver
24
connective tissue
23
vasculature
21
blood vessel
18
ureter
14
artery
10
lung
9
blood
9
bodily fluid
8
bone element
8
skeleton
7
adipose tissue
5
eye
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
62
AMP
49
HPAP
Genome assembly (visualization)
51
GRCh38
38
hg19
Lab
62
AMP-T2D consortium
49
Klaus Kaestner, Upenn
Audit category:
21
inconsistent ontology term
month_released!
February, 2023
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
111 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
1
+ See 13 more…
cell line
EndoC_BH1
19
glomerular visceral epithelial cell
1
See all biosamples
Download