Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1269
total RNA-seq
1193
ChIP-seq
240
ATAC-seq
181
DNase-seq
175
single cell RNA-seq
87
RNA microarray
40
pCHi-C
28
WGBS
26
snATAC-seq
24
Hi-C
16
small RNA-seq
11
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
26
DNA accessibility
Date released
10
April, 2020
8
January, 2021
6
August, 2021
February, 2023
1
August, 2022
1
May, 2022
Available data
1
bed bed3+
1
txt
Organism
25
Homo sapiens
Biosample type
primary cell
26
tissue
Organ
10
lung
9
pancreas
6
kidney
1
musculature of body
Project
10
LungMap
8
AMP
8
T1D
Genome assembly (visualization)
1
hg19
Lab
10
Xin Sun, UCSD
8
Kyle Gaulton, UCSD
6
Katalin Susztak, Upenn
2
AMP-T2D consortium
Audit category:
2
audit script error
month_released!
February, 2023
target.investigated_as!
broad histone mark
biosample_type!
primary cell
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
tissue
lung
10
kidney
6
islet of Langerhans
5
pancreas
4
skeletal muscle tissue
1
Download