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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
17
pCHi-C
16
snATAC-seq
Assay category
100
Transcription
16
DNA accessibility
Target of assay
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
68
May, 2021
45
May, 2020
February, 2023
16
January, 2021
4
March, 2020
Available data
98
bam
98
bigWig
98
tsv
Organism
133
Homo sapiens
Biosample type
120
primary cell
11
tissue
2
cell line
Organ
12
pancreas
8
blood
8
bodily fluid
2
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
3253
AMP
248
HPAP
133
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
129
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
month_released!
February, 2023
target.investigated_as!
histone
BIOSAMPLE
ASSAY
133 results
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total RNA-seq
pCHi-C
snATAC-seq
primary cell
monocyte
53
1
peripheral blood mononuclear cell
8
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
+ See 31 more…
tissue
islet of Langerhans
2
4
pancreas
4
thymus
1
cell line
EndoC_BH1
2
See all biosamples
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